Index A | B | C | D | E | F | G | I | M | N | O | R | S | T A A_B (seamm_ff_util.forcefield.NonbondForms attribute) a_b_to_sigma_eps() (seamm_ff_util.forcefield.Forcefield static method) angle_angle_parameters() (seamm_ff_util.forcefield.Forcefield method) angle_angle_torsion_1_parameters() (seamm_ff_util.forcefield.Forcefield method) angle_parameters() (seamm_ff_util.forcefield.Forcefield method) angle_torsion_3_parameters() (seamm_ff_util.forcefield.Forcefield method) AR_BR (seamm_ff_util.forcefield.NonbondForms attribute) ar_br_to_sigma_eps() (seamm_ff_util.forcefield.Forcefield static method) assign() (seamm_ff_util.ff_assigner.FFAssigner method) assign_forcefield() (seamm_ff_util.forcefield.Forcefield method) B bond_angle_parameters() (seamm_ff_util.forcefield.Forcefield method) bond_bond_1_3_parameters() (seamm_ff_util.forcefield.Forcefield method) bond_bond_parameters() (seamm_ff_util.forcefield.Forcefield method) bond_increments() (seamm_ff_util.forcefield.Forcefield method) bond_parameters() (seamm_ff_util.forcefield.Forcefield method) C charges() (seamm_ff_util.forcefield.Forcefield method) cite_parameter() (seamm_ff_util.forcefield.Forcefield method) clear() (seamm_ff_util.forcefield.Forcefield method) current_forcefield (seamm_ff_util.forcefield.Forcefield property) D draw_atom_types() (seamm_ff_util.ff_assigner.FFAssigner method) E eex_1_3_bond_bond() (seamm_ff_util.forcefield.Forcefield method) eex_angle() (seamm_ff_util.forcefield.Forcefield method) eex_angle_angle() (seamm_ff_util.forcefield.Forcefield method) eex_angle_torsion_angle() (seamm_ff_util.forcefield.Forcefield method) eex_atomic_charge() (seamm_ff_util.forcefield.Forcefield method) eex_atoms() (seamm_ff_util.forcefield.Forcefield method) eex_bond() (seamm_ff_util.forcefield.Forcefield method) eex_bond_angle() (seamm_ff_util.forcefield.Forcefield method) eex_bond_bond() (seamm_ff_util.forcefield.Forcefield method) eex_bond_charge_increment() (seamm_ff_util.forcefield.Forcefield method) eex_charge() (seamm_ff_util.forcefield.Forcefield method) eex_out_of_plane() (seamm_ff_util.forcefield.Forcefield method) eex_pair() (seamm_ff_util.forcefield.Forcefield method) eex_shell_model() (seamm_ff_util.forcefield.Forcefield method) eex_torsion() (seamm_ff_util.forcefield.Forcefield method) eex_torsion_angle() (seamm_ff_util.forcefield.Forcefield method) eex_torsion_end_bond() (seamm_ff_util.forcefield.Forcefield method) eex_torsion_middle_bond() (seamm_ff_util.forcefield.Forcefield method) end_bond_torsion_3_parameters() (seamm_ff_util.forcefield.Forcefield method) energy_expression() (seamm_ff_util.forcefield.Forcefield method) F FFAssigner (class in seamm_ff_util.ff_assigner) fftype (seamm_ff_util.forcefield.Forcefield property) filename (seamm_ff_util.forcefield.Forcefield property) files_visited (seamm_ff_util.forcefield.Forcefield property) Forcefield (class in seamm_ff_util.forcefield) forcefields (seamm_ff_util.forcefield.Forcefield property) G get_fragments() (seamm_ff_util.forcefield.Forcefield method) get_templates() (seamm_ff_util.forcefield.Forcefield method) I initialize_biosym_forcefield() (seamm_ff_util.forcefield.Forcefield method) M make_canonical() (seamm_ff_util.forcefield.Forcefield method) mass() (seamm_ff_util.forcefield.Forcefield method) middle_bond_torsion_3_parameters() (seamm_ff_util.forcefield.Forcefield method) module seamm_ff_util seamm_ff_util.ff_assigner seamm_ff_util.forcefield seamm_ff_util.metadata seamm_ff_util.tabulate N no_transform() (seamm_ff_util.forcefield.Forcefield static method) nonbond_parameters() (seamm_ff_util.forcefield.Forcefield method) nonbond_transformation() (seamm_ff_util.forcefield.Forcefield static method) NonbondForms (class in seamm_ff_util.forcefield) O oop_parameters() (seamm_ff_util.forcefield.Forcefield method) R references (seamm_ff_util.forcefield.Forcefield property) RMIN_EPS (seamm_ff_util.forcefield.NonbondForms attribute) rmin_eps_to_sigma_eps() (seamm_ff_util.forcefield.Forcefield static method) rmin_to_sigma() (seamm_ff_util.forcefield.Forcefield static method) S seamm_ff_util module seamm_ff_util.ff_assigner module seamm_ff_util.forcefield module seamm_ff_util.metadata module seamm_ff_util.tabulate module setup_topology() (seamm_ff_util.forcefield.Forcefield method) shell_model() (seamm_ff_util.forcefield.Forcefield method) SIGMA_EPS (seamm_ff_util.forcefield.NonbondForms attribute) sigma_to_rmin() (seamm_ff_util.forcefield.Forcefield static method) T tabulate_angle() (in module seamm_ff_util.tabulate) terms (seamm_ff_util.forcefield.Forcefield property) torsion_parameters() (seamm_ff_util.forcefield.Forcefield method)
