Index

A

accepts_topology() (in module extract_clusters_step.cluster_sampling)

analyze() (extract_clusters_step.extract_clusters.ExtractClusters method)

B

bond_index_pairs() (in module extract_clusters_step.cluster_sampling)

C

canvas (extract_clusters_step.tk_extract_clusters.TkExtractClusters attribute) check_bonds() (in module extract_clusters_step.cluster_sampling) classify_motif() (in module extract_clusters_step.cluster_sampling) cluster_motif() (in module extract_clusters_step.cluster_sampling)

cluster_summary() (in module extract_clusters_step.cluster_sampling) create_dialog() (extract_clusters_step.tk_extract_clusters.TkExtractClusters method) create_node() (extract_clusters_step.extract_clusters_step.ExtractClustersStep method) create_tk_node() (extract_clusters_step.extract_clusters_step.ExtractClustersStep method)

D

description() (extract_clusters_step.extract_clusters_step.ExtractClustersStep method)

description_text() (extract_clusters_step.extract_clusters.ExtractClusters method) dialog (extract_clusters_step.tk_extract_clusters.TkExtractClusters attribute)

E

edit() (extract_clusters_step.tk_extract_clusters.TkExtractClusters method) extract_clusters_step module extract_clusters_step.cluster_sampling module extract_clusters_step.extract_clusters module extract_clusters_step.extract_clusters_parameters module

extract_clusters_step.extract_clusters_step module extract_clusters_step.metadata module extract_clusters_step.tk_extract_clusters module extract_nmers() (in module extract_clusters_step.cluster_sampling) ExtractClusters (class in extract_clusters_step.extract_clusters) ExtractClustersParameters (class in extract_clusters_step.extract_clusters_parameters) ExtractClustersStep (class in extract_clusters_step.extract_clusters_step)

G

git_revision (extract_clusters_step.extract_clusters.ExtractClusters property)

grow_connected() (in module extract_clusters_step.cluster_sampling)

H

h (extract_clusters_step.tk_extract_clusters.TkExtractClusters attribute)

handle_dialog() (extract_clusters_step.tk_extract_clusters.TkExtractClusters method) handle_help() (extract_clusters_step.tk_extract_clusters.TkExtractClusters method)

M

make_put_property() (in module extract_clusters_step.cluster_sampling) module extract_clusters_step extract_clusters_step.cluster_sampling extract_clusters_step.extract_clusters extract_clusters_step.extract_clusters_parameters extract_clusters_step.extract_clusters_step extract_clusters_step.metadata extract_clusters_step.tk_extract_clusters

molecule_neighbour_graph() (in module extract_clusters_step.cluster_sampling) motif_names() (in module extract_clusters_step.cluster_sampling) my_description (extract_clusters_step.extract_clusters_step.ExtractClustersStep attribute), [1], [2], [3], [4]

N

node (extract_clusters_step.tk_extract_clusters.TkExtractClusters attribute)

O

options (extract_clusters_step.extract_clusters.ExtractClusters attribute)

P

parameters (extract_clusters_step.extract_clusters.ExtractClusters attribute) (extract_clusters_step.extract_clusters_parameters.ExtractClustersParameters attribute)

parser (extract_clusters_step.extract_clusters.ExtractClusters attribute) pilot_spreads() (in module extract_clusters_step.cluster_sampling) property_tag (extract_clusters_step.extract_clusters.ExtractClusters property)

R

reset_dialog() (extract_clusters_step.tk_extract_clusters.TkExtractClusters method)

right_click() (extract_clusters_step.tk_extract_clusters.TkExtractClusters method) run() (extract_clusters_step.extract_clusters.ExtractClusters method)

S

self (extract_clusters_step.tk_extract_clusters.TkExtractClusters attribute)

T

tk_flowchart (extract_clusters_step.tk_extract_clusters.TkExtractClusters attribute)

TkExtractClusters (class in extract_clusters_step.tk_extract_clusters)

U

unwrap_shifts() (in module extract_clusters_step.cluster_sampling)

V

version (extract_clusters_step.extract_clusters.ExtractClusters property)

W

w (extract_clusters_step.tk_extract_clusters.TkExtractClusters attribute)

X

x (extract_clusters_step.tk_extract_clusters.TkExtractClusters attribute)

Y

y (extract_clusters_step.tk_extract_clusters.TkExtractClusters attribute)